Protein list:

Seperate proteins by space | Example

Select nodes using shift click or drag to add to this list
Protein:

Eg: PBRM1 | ARID1A | BRCA1
Function:

Eg: Homologous recombination
Path:


Eg: SMC5 > DMC1 | PBRM1 > BRCA2
Relationship:

Full list of relationships
Graph tools:

Note this may take some time with > 30 proteins
Filter Graph:

0.5
Layout:
  🔂

Click a node or edge for more data...
Filter Table:
SourceTargetRelationship TypeDirectedSignDB ScorePKG ScoreDatabaseReferences
RECQL4 POLB â—¼   POST_TRANSLATIONAL_REGULATION ✅ + 2.0 0.8 Omnipath 19567405
CDH1 EPCAM â—¼   PHYSICAL_INTERACTION 2.0 0.8 intact 108050 32814053
EPCAM LSR â—¼   CORRELATES + 0.8 0.8 CCLE 31978347
CDH1 PKP3 â—¼   CORRELATES + 0.8 0.8 CCLE 31978347
EPCAM PKP3 â—¼   CORRELATES + 0.81 0.81 CCLE 31978347
TDG LIMD2 â—¼   KO_UP_REGULATES ✅ + 0.84 0.84 PKG 28854368
CDH1 EPCAM â—¼   CORRELATES + 0.85 0.85 CCLE 31978347
RECQL4 LIMD2 â—¼   KO_DOWN_REGULATES ✅ - -0.87 0.86 PKG 28854368
DDB2 LIMD2 â—¼   KO_DOWN_REGULATES ✅ - -1.01 1.0 PKG 28854368
XRCC4 LIMD2 â—¼   KO_UP_REGULATES ✅ + 1.04 1.04 PKG 28854368
XRCC4 TDG â—¼   KO_UP_REGULATES ✅ + 1.27 1.27 PKG 28854368
FAN1 LIMD2 â—¼   KO_DOWN_REGULATES ✅ - -1.59 1.58 PKG 28854368
POLB LIMD2 â—¼   KO_UP_REGULATES ✅ + 1.6 1.6 PKG 28854368
RECQL4 RECQL4 â—¼   KO_DOWN_REGULATES ✅ - -2.61 2.61 PKG 28854368
TDG TDG â—¼   KO_DOWN_REGULATES ✅ - -3.98 3.97 PKG 28854368
DDB2 DDB2 â—¼   KO_DOWN_REGULATES ✅ - -5.71 5.7 PKG 28854368
XRCC4 XRCC4 â—¼   KO_DOWN_REGULATES ✅ - -6.32 6.31 PKG 28854368
POLB POLB â—¼   KO_DOWN_REGULATES ✅ - -7.24 7.23 PKG 28854368