PKG

Protein list:

Seperate proteins by space | Example

Select nodes using shift click or drag to add to this list

Protein:

Eg: PBRM1 | ARID1A | BRCA1

Function:

Eg: Homologous recombination

Path:

Eg: SMC5 > DMC1 | PBRM1 > BRCA2

Relationship:

Full list of relationships

Graph tools:

Note this may take some time with > 30 proteins

Filter Graph:

PKG Score Threshold: 0.8

Layout:
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Filter Table:

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Source	Target	Relationship Type	Directed	Sign	DB Score	PKG Score	Database	References
ACTB	WDR1	◼ PHYSICAL_INTERACTION			2.0	0.8	intact	000924 30021884
ACTB	CTTN	◼ POST_TRANSLATIONAL_REGULATION	✅	+	2.0	0.8	Omnipath	11018051 7680654
ACTB	ARPC2	◼ POST_TRANSLATIONAL_REGULATION	✅	+	2.0	0.8	Omnipath	10592173 9600938
ACTB	SVIL	◼ PHYSICAL_INTERACTION			826.0	0.82	STRING	36370105
ACTB	CFL1	◼ PHYSICAL_INTERACTION			0.87	0.87	HuRI	32296183
ACTB	CFL2	◼ PHYSICAL_INTERACTION			905.0	0.9	STRING	36370105
ACTB	SPTBN2	◼ PHYSICAL_INTERACTION			905.0	0.9	STRING	36370105
ACTB	CFL1	◼ POST_TRANSLATIONAL_REGULATION	✅	-	16.0	1.0	Omnipath	8913641 25416956 15364581 10592173 19704022 16189514 31515488 32296183 16713569 29892012 10980704
ACTN1	ACTN4	◼ PHYSICAL_INTERACTION			952.0	0.95	STRING	36370105
ACTN4	MAGI1	◼ PHYSICAL_INTERACTION			0.88	0.88	HIPPIE	12042308 16713569

Showing 1 to 10 of 249 entries