Protein list:

Seperate proteins by space | Example

Select nodes using shift click or drag to add to this list

Protein:

Eg: PBRM1 | ARID1A | BRCA1
Function:

Eg: Homologous recombination
Path:


Eg: SMC5 > DMC1 | PBRM1 > BRCA2
Relationship:

Full list of relationships
Graph tools:

Note this may take some time with > 30 proteins

Filter Graph:

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Filter Table:
SourceTargetRelationship TypeDirectedSignDB ScorePKG ScoreDatabaseReferences
PRPH PIH1D2 â—¼   PHYSICAL_INTERACTION 2.0 0.8 intact 108050 32814053
C2CD6 VIM â—¼   PHYSICAL_INTERACTION 2.0 0.8 intact 16189514 5217968
PARP2 CT55 â—¼   ADP_RIBOSYLATION ✅ 2.0 0.8 intact 8201796 21812934
VIM DES â—¼   PHYSICAL_INTERACTION 2.0 0.8 intact 20156660 27107012
GFAP DES â—¼   PHYSICAL_INTERACTION 2.0 0.8 intact 108050 32814053
DES VIM â—¼   POST_TRANSLATIONAL_REGULATION ✅ + 2.0 0.8 Omnipath 32296183 27107012
VIM GFAP â—¼   PHYSICAL_INTERACTION 2.0 0.8 intact 16189514 5217968
VPS16 VPS18 â—¼   CORRELATES + 0.84 0.84 CCLE 31978347
CT55 VPS16 â—¼   PHYSICAL_INTERACTION 865.0 0.86 STRING 36370105
PARP2 VIM â—¼   KO_DOWN_REGULATES ✅ - -0.87 0.86 PKG 28854368
TXLNB VIM â—¼   PHYSICAL_INTERACTION 0.87 0.87 HuRI 32296183
DES PRPH â—¼   CORRELATES + 0.88 0.88 CCLE 31978347
DES VIM â—¼   PHYSICAL_INTERACTION 0.89 0.89 HuRI 32296183
VIM PRPH â—¼   PHYSICAL_INTERACTION 3.0 0.9 intact 21900206 2001699 8089645
DES VIM â—¼   CORRELATES + 0.92 0.92 CCLE 31978347
PRPH VIM â—¼   CORRELATES + 0.94 0.94 CCLE 31978347
VPS16 VPS18 â—¼   PHYSICAL_INTERACTION 991.0 0.99 STRING 36370105
VPS16 VPS41 â—¼   PHYSICAL_INTERACTION 992.0 0.99 STRING 36370105
VPS18 VPS41 â—¼   PHYSICAL_INTERACTION 993.0 0.99 STRING 36370105
PARP2 PARP2 â—¼   KO_DOWN_REGULATES ✅ - -6.68 6.67 PKG 28854368