PKG

Protein list:

Seperate proteins by space | Example

Select nodes using shift click or drag to add to this list

Protein:

Eg: PBRM1 | ARID1A | BRCA1

Function:

Eg: Homologous recombination

Path:

Eg: SMC5 > DMC1 | PBRM1 > BRCA2

Relationship:

Full list of relationships

Graph tools:

Note this may take some time with > 30 proteins

Filter Graph:

PKG Score Threshold: 0.8

Layout:
🔂

Click a node or edge for more data...

Filter Table:

Show entries

Search:

Source	Target	Relationship Type	Directed	Sign	DB Score	PKG Score	Database	References
BRCA1	CDK9	◼ PHYSICAL_INTERACTION			0.83	0.83	HIPPIE	22990118 28278048
BRCA1	NCOA3	◼ PHYSICAL_INTERACTION			0.84	0.84	HIPPIE	14578343 16860316
BRCA1	CREBBP	◼ PHYSICAL_INTERACTION			871.0	0.87	STRING	36370105
BRCA1	MYC	◼ PHYSICAL_INTERACTION			873.0	0.87	STRING	36370105
BRCA1	NCOA2	◼ PHYSICAL_INTERACTION			0.88	0.88	HIPPIE	11085509 14578343 16860316
BRCA1	TP53	◼ PHYSICAL_INTERACTION			900.0	0.9	STRING	36370105
BRCA1	ESR1	◼ PHYSICAL_INTERACTION			900.0	0.9	STRING	36370105
BRCA1	NFE2L2	◼ POST_TRANSLATIONAL_REGULATION	✅	+	3.0	0.9	Omnipath	15520196
BRCA1	POLR2A	◼ PHYSICAL_INTERACTION			993.0	0.99	STRING	36370105
BRCA1	SIRT1	◼ TRANSCRIPTIONAL_REGULATION	✅	+	4.0	1.0	Omnipath	20160719 18851829 9000507 21407215

Showing 1 to 10 of 383 entries