PKG

Protein list:

Seperate proteins by space | Example

Select nodes using shift click or drag to add to this list

Protein:

Eg: PBRM1 | ARID1A | BRCA1

Function:

Eg: Homologous recombination

Path:

Eg: SMC5 > DMC1 | PBRM1 > BRCA2

Relationship:

Full list of relationships

Graph tools:

Note this may take some time with > 30 proteins

Filter Graph:

PKG Score Threshold: 0.8

Layout:
🔂

Click a node or edge for more data...

Filter Table:

Show entries

Search:

Source	Target	Relationship Type	Directed	Sign	DB Score	PKG Score	Database	References
ACTB	ICAM1	◼ PHYSICAL_INTERACTION			0.82	0.82	HIPPIE	31536960 23463506
ACTB	RHOA	◼ PHYSICAL_INTERACTION			5.0	1.0	Reactome	12805219 18001770 12732141 12429848 18923426
AGR2	FAS	◼ PHYSICAL_INTERACTION			0.82	0.82	HIPPIE	31436131 30575818
AGR2	S100P	◼ PHYSICAL_INTERACTION			0.82	0.82	HIPPIE	31436131 30575818
ARHGDIA	RHOA	◼ PHYSICAL_INTERACTION			990.0	0.99	STRING	36370105
ARHGDIA	RHOA	◼ POST_TRANSLATIONAL_REGULATION	✅	-	23.0	1.0	Omnipath	10489445 20628200 11368848 17353931 9490022 9113980 25416956 20711218 16189514 15659383 14749388 11149925
BMI1	RYBP	◼ PHYSICAL_INTERACTION			893.0	0.89	STRING	36370105
BRCA1	IGF1R	◼ TRANSCRIPTIONAL_REGULATION	✅	+	2.0	0.8	Omnipath	11001824 19223505
BRCA1	SOX2	◼ POST_TRANSLATIONAL_REGULATION	✅	+	2.0	0.8	Omnipath	15574597
BRCA1	TERF1	◼ PHYSICAL_INTERACTION			0.83	0.83	HIPPIE	19797051 29656893 34112789

Showing 1 to 10 of 344 entries