PKG

Protein list:

Seperate proteins by space | Example

Select nodes using shift click or drag to add to this list

Protein:

Eg: PBRM1 | ARID1A | BRCA1

Function:

Eg: Homologous recombination

Path:

Eg: SMC5 > DMC1 | PBRM1 > BRCA2

Relationship:

Full list of relationships

Graph tools:

Note this may take some time with > 30 proteins

Filter Graph:

PKG Score Threshold: 0.8

Layout:
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Filter Table:

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Source	Target	Relationship Type	Directed	Sign	DB Score	PKG Score	Database	References
ATM	H2AX	◼ COLOCALIZATION			2.0	0.8	intact	16858402 5218840
ATM	CHEK1	◼ PHOSPHORYLATION	✅	+	0.82	0.82	Signor	20068082
ATM	MDC1	◼ PHOSPHORYLATION	✅	+	0.82	0.82	Signor	12607003
ATM	NBN	◼ PHOSPHORYLATION	✅	+	0.83	0.83	Signor	10802669
ATM	H2AX	◼ PHYSICAL_INTERACTION			0.87	0.87	HIPPIE	18344987 26095369 21704408 22451927 11893489 20081839 16858402 9488723 22184063 11571274 21676867 32518374 27918549
ATM	BRCA1	◼ PHYSICAL_INTERACTION			875.0	0.87	STRING	36370105
ATM	H2AFX	◼ PHYSICAL_INTERACTION			885.0	0.88	STRING	36370105
ATM	SMARCC2	◼ POST_TRANSLATIONAL_REGULATION	✅	+	3.0	0.9	Omnipath	19525936
ATM	TP53BP1	◼ PHYSICAL_INTERACTION			910.0	0.91	STRING	36370105
ATM	NBN	◼ PHYSICAL_INTERACTION			914.0	0.91	STRING	36370105

Showing 1 to 10 of 248 entries