PKG

Protein list:

Seperate proteins by space | Example

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Protein:

Eg: PBRM1 | ARID1A | BRCA1

Function:

Eg: Homologous recombination

Path:

Eg: SMC5 > DMC1 | PBRM1 > BRCA2

Relationship:

Full list of relationships

Graph tools:

Note this may take some time with > 30 proteins

Filter Graph:

PKG Score Threshold: 0.8

Layout:
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Filter Table:

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Source	Target	Relationship Type	Directed	Sign	DB Score	PKG Score	Database	References
CNOT1	RQCD1	◼ CORRELATES		+	0.8	0.8	CCLE	31978347
CNOT1	RQCD1	◼ PHYSICAL_INTERACTION			996.0	0.99	STRING	36370105
FLNB	FLNC	◼ PHYSICAL_INTERACTION			0.86	0.86	HIPPIE	22863883 19293945
HSPB1	UBE2N	◼ POST_TRANSLATIONAL_REGULATION	✅	+	2.0	0.8	Omnipath	18950704
HSPB1	TP53	◼ PHYSICAL_INTERACTION			848.0	0.84	STRING	36370105
HSPB1	TP53	◼ POST_TRANSLATIONAL_REGULATION	✅	-	9.0	1.0	Omnipath	25241761 16169070 16713569 17184779
NAA10	NACA	◼ CORRELATES		+	0.81	0.81	CCLE	31978347
PIN1	TP53	◼ POST_TRANSLATIONAL_REGULATION	✅	+	19.0	1.0	Omnipath	12397362 12388558 17906639 12397361 21741598 16713569 24982848 21900206
PRS4	UBE3A	◼ PHYSICAL_INTERACTION			0.83	0.83	HIPPIE	22645313 29426014 26496610 30257870 29511261
PRS4	PSMD3	◼ PHYSICAL_INTERACTION			0.94	0.94	HIPPIE	33961781 26344197 22939629 26496610 22863883

Showing 1 to 10 of 243 entries