PKG

Protein list:

Seperate proteins by space | Example

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Protein:

Eg: PBRM1 | ARID1A | BRCA1

Function:

Eg: Homologous recombination

Path:

Eg: SMC5 > DMC1 | PBRM1 > BRCA2

Relationship:

Full list of relationships

Graph tools:

Note this may take some time with > 30 proteins

Filter Graph:

PKG Score Threshold: 0.8

Layout:
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Filter Table:

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Search:

Source	Target	Relationship Type	Directed	Sign	DB Score	PKG Score	Database	References
CALM1	CALM3	◼ PHYSICAL_INTERACTION			800.0	0.8	STRING	36370105
CALM1	CALM2	◼ PHYSICAL_INTERACTION			800.0	0.8	STRING	36370105
CALM1	RAC1	◼ POST_TRANSLATIONAL_REGULATION	✅	+	2.0	0.8	Omnipath	9813038 8918462
CALM1	CAMK2D	◼ POST_TRANSLATIONAL_REGULATION	✅	+	2.0	0.8	Omnipath	20668654
CALM1	CAMK2D	◼ PHYSICAL_INTERACTION			843.0	0.84	STRING	36370105
CALM1	CAMK2B	◼ PHYSICAL_INTERACTION			844.0	0.84	STRING	36370105
CALM1	CAMK2A	◼ PHYSICAL_INTERACTION			846.0	0.84	STRING	36370105
CALM1	SNCA	◼ PHYSICAL_INTERACTION			894.0	0.89	STRING	36370105
CALM1	CAMK2G	◼ POST_TRANSLATIONAL_REGULATION	✅	+	3.0	0.9	Omnipath	10860555 20668654
CALM1	RAC1	◼ PHYSICAL_INTERACTION			4.0	1.0	Reactome	22944912 21299499 21730051 9199170

Showing 1 to 10 of 316 entries